BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015H08SP1|AL426923
(765 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1327 1075 0.0
3x_Contig920 134 2e-31
>3x_Contig1327
Length = 7237
Score = 1075 bits (537), Expect = 0.0
Identities = 561/571 (98%), Gaps = 2/571 (0%)
Strand = Plus / Minus
Query: 196 cccctctatagagttacctggtttcatcgatttctttgtcaaag-tttccctgccttcaa 254
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 7237 cccctctatagagttacctggtttcatcgatttctttgtcaaagatttccctgccttcaa 7178
Query: 255 cgttatcgtggtcgtttacgtcgcgactatcgtcgttctcatcttcctcgtcctctgctt 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7177 cgttatcgtggtcgtttacgtcgcgactatcgtcgttctcatcttcctcgtcctctgctt 7118
Query: 315 cgtcttcctcgtcatctatatcgtcttcctcgtcatcagaatcgcttgagttcgacgatg 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7117 cgtcttcctcgtcatctatatcgtcttcctcgtcatcagaatcgcttgagttcgacgatg 7058
Query: 375 aatgggaagttgaagatatcccaaacttgatgctcttgtcagaaagtgggtgttgtgatc 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7057 aatgggaagttgaagatatcccaaacttgatgctcttgtcagaaagtgggtgttgtgatc 6998
Query: 435 cgccgwtgtgagttagttgttgatgttgaggcaacatcacttttgacaacgcgtccagat 494
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6997 cgccgttgtgagttagttgttgatgttgaggcaacatcacttttgacaacgcgtccagat 6938
Query: 495 tcaaatttggtagacttgcgctawaattgattggytggctagtgctatgggtcttggtat 554
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 6937 tcaaatttggtagacttgcgctataattgattggttggctagtgctatgggtcttggtat 6878
Query: 555 gagatagagtgatcggagactcatttgacgatgangggttctttcttcttttcttcaagc 614
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6877 gagatagagtgatcggagactcatttgacgatgatgggttctttcttcttttcttcaagc 6818
Query: 615 cgcngggatctaacatgaattcgttggcagacttcgttagaaacctatctatctggtctt 674
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6817 cgctgggatctaacatgaattcgttggcagacttcgttagaaacctatctatctggtctt 6758
Query: 675 ttgaattaccaagwtaggttcaaattaacwtgttcaccaggtacgtatgacataggggca 734
||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 6757 ttgaattaccaagtt-ggttcaaattaacttgttcaccaggtacgtatgacataggggca 6699
Query: 735 gcmatgctacttagctgcattgcattattat 765
|| ||||||||||||||||||||||||||||
Sbjct: 6698 gccatgctacttagctgcattgcattattat 6668
>3x_Contig920
Length = 3306
Score = 134 bits (67), Expect = 2e-31
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 5 gcaacaccggtwgcagcaccagatgtagcagcagctgatgcgttgctttcttgtttggga 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 gcaacaccggtagcagcaccagatgtagcagcagctgatgcgttgctttcttgtttggga 16
Query: 65 whttctgtgtctg 77
|||||||||||
Sbjct: 15 ttttctgtgtctg 3
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4895
Number of Sequences: 1807
Number of extensions: 4895
Number of successful extensions: 140
Number of sequences better than 1.0e-20: 2
length of query: 765
length of database: 10,358,551
effective HSP length: 16
effective length of query: 749
effective length of database: 10,329,639
effective search space: 7736899611
effective search space used: 7736899611
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)